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The current version of Bhageerath web server has been validated for the 50 globular proteins ( < 100 amino acids) consisting of 2-3 secondary structural elements (helices and strands). In each case it predicts a structure < 6 Å RMSD of the native in the final 10 lowest energy structures. The following table provides the PDB ID and name of the protein. Click on any PDB ID to access the predicted 10 lowest energy structures and their RMSDs.

Validation of Bhageerath
S. No. PDB ID NAME
1
1AB1
Si form Crambin
2
1ACW
P01, A Natural Scorpion Peptide Structurally Analogous to Scorpion Toxins Specific for Apamin-Sensitive Potassium Channel
3
1AHO
The Ab Initio Structure Determination and Refinement of a Scorpion Protein Toxin
4
1AIL
N-Terminal Fragment of NS1 Protein from Influenza A Virus
5
1B03
Solution Structure of Antibody-Bound HIV1 IIIB V3 Peptide
6
1B6Q
Alanine 31 Proline Mutant of Rop Protein
7
1BDC
Immunoglobulin-Binding B Domain of Staphylococcus Aureus Protein A
8
1BGK
Sea Anemone Toxin (BGK) with High Affinity for Voltage Dependent Potassium Channel
9
1BHI
Structure of Transactivation Domain of CRE-BP1/ATF-2
10
1BX7
Hirustasin from Hirudo Medicinalis
11
1DF5
Interactions between HIV-1 GP41 Core and Detergents and their Implications for Membrane Fusion
12
1DFN
Crystal Structure of Defensin HNP-3, an Amphiphilic Dimer Mechanisms of Membrane Permeabilization
13
1DV0
C-Terminal Uba Domain of Human Homologue of Rad23A (Hhr23A)
14
1E0Q
Mutant Peptide from the First N-Terminal 17 Amino Acid of Ubiquitin
15
1EDM
Epidermal Growth Factor-like Domain from Human Factor IX
16
1ENH
Structural Studies of the Engrailed Homeodomain
17
1FME
Solution Structure Of Fsd-Ey, A Novel Peptide Assuming A .-.-. Fold
18
1GAB
Structure of Albumin-Binding Domain
19
1GUU
Crystal Structure of C-Myb R1
20
1GV5
Crystal Structure of C-Myb R2
21
1GVD
Crystal Structure of C-Myb R2 V103L Mutant
22
1HDD
Engrailed Homeodomain
23
1I5X
HIV-1 GP41 Core
24
1I5Y
HIV-1 GP41 Core
25
1I6C
Solution Structure of PIN1 WW Domain
26
1IDY
Structure Of Myb Transforming Protein
27
1IRQ
Crystal Structure of Omega Transcriptional Repressor
28
1KU3
Crystal Structure of Thermus Aquatics RNA Polymerase Sigma Subunit Fragment, Region 4
29
1MBH
Mouse C-Myb DNA-Binding Domain Repeat 2
30
1MOF
Coat Protein
31
1NKD
Atomic Resolution (1.07 Structure of the Rop Mutant
32
1OVX
E.Coli ClpX chaperone zinc binding domain dimer
33
1PRV
Purine Repressor DNA-Binding Domain
34
1Q2K
Structure of BmBKTx1 a new potassium channel blocker from the Chinese Scorpion Buthus martensi Karsch
35
1QR8
Inhibition of HIV-1 Infectivity by Gp41 Core
36
1QR9
Inhibition of HIV-1 Infectivity by the GP41 Core: Role of a Conserved Hydrophobic Cavity in Membrane Fusion
37
1RES
Structure of SHK Toxin
38
1RJU
Crystal Structure Of A Truncated Form Of Yeast Copper Thionein
39
1ROO
Structure of SHK Toxin
40
1ROP
Structure of the ColE1 Rop Protein
41
1RPO
Rop Mutant with Ala Inserted on either Side of Asp 31
42
1SCY
Three Dimensional Structure of Scylltoxin
43
1VII
Thermostable Subdomain From Chicken Villin Headpiece
44
1WQC
An unusual fold for potassium channel blockers
45
1XRX
DNA-Binding Protein
46
1YIB
Structure of Human EB1 C- Terminal Dimerization Domain
47
1YRF
Chicken Villin Subdomain Hp-35
48
1YRI
Chicken Villin Subdomain Hp-35, N68H
49
2CPG
Transcriptional Repressor COPG
50
2ERL
Pheromone ER-1