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Validation of Bhageerath

PDB ID 1BGK
Protein Name Sea Anemone Toxin (BGK) with High Affinity for Voltage Dependent Potassium Channel
Sequence (FASTA format) VCRDWFKETACRHAKSLGNCRTSQKYRANCAKTCELC
Secondary Structure Information H 8-17, H 24-27, H 31-34
Native Structure 1bgk
H - Helix, B - Beta strand
The figure shows the Superimposition of the native structure with the lowest RMSD structure (PDB3) from the 10 lowest energy structures (Native is shown in Blue and lowest RMSD structure is in Red)
Predicted Structures
S.No Final 10 lowest energy structures RMSD(Å)
without end loops
1
PDB1
5.8
2
PDB2
5.9
3
PDB3
4.1
4
PDB4
6.1
5
PDB5
5.8
6
PDB6
5.5
7
PDB7
5.5
8
PDB8
4.9
9
PDB9
5.2
10
PDB10
6.1