An automated energy based protein tertiary structure prediction web server. Starting with sequence and secondary structure information, the web server predicts 5 native-like candidate structures for the protein.
A Homology ab-intio Hybrid Web server for Protein Tertiary Structure Prediction. Starting with sequence, the web server predicts 5 native-like candidate structures for the protein.
A biophysical filter, which calculates the maximum length of the polypeptide chain in one direction. It is one of the filters employed in the Bhageerath web server for rejection of the non-native like structures from the initial ensemble of trial structures
A biophysical filter, which is related to the diameter of the protein structure. It is also currently a part of the Bhageerath web server and is utilized for rejection of non-native like structures.
It comes under the category of biophysical filters, whereby it can help in accepting or rejecting a candidate structure depending on the ratio of accessible surface areas of the hydrophobic and hydrophilic residues.
It comes under the category of biophysical filters, whereby it can help to evaluate the value of packing fraction for a given protein and to find out whether the value is in acceptable limits for globular protein or not.
