D2N:Distance to Native

Reliability of modeled protein structures has emerged as one of the biggest concerns in protein structure prediction (PSP) research. D2N is a distance metric created out of four physicochemical parameters for predicting RMSD of a modeled protein structure in the absence of a knowledge of its native form. Currently, D2N also calculates TM and GDT scores to assess the quality of the modeled input structure.                                       








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References

1. Distance to the native, Avinash Mishra, Prashant Singh Rana, Aditya Mittal, B. Jayaram*, 2013. Manuscript submitted



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