Unique Sequence Predictor

click here to see flow chart

Frequency Counter

Submit sequence of interest to find Chromosome-wise frequency.

Position Finder

Gives start position of the query sequence in the genome. This serves as input for Nucleotide Sequence Extender.


Nucleotide Sequence Extender

This predicts shortest unique sequences in all three possible directions.


To get unique sequence > 30 neucleotide

Select direction of your choice.


Closest Sequence Finder

This tool identifies the sequence next closest to the unique sequence predicted by nucleotide sequence extender. If nucleotide extender predicts a sequence which is 'n' nucleotide long then closest sequence finder locates the occurrence of 'n-1' and 'n-2' sequences in the whole genome. This will help the user to identify the sequence where the drug may bind non-specifically.


Additional Analysis